.. Applications documentation master file, created by
   sphinx-quickstart on Tue Mar 12 09:16:17 2013.
   You can adapt this file completely to your liking, but it should at least
   contain the root `toctree` directive.

Welcome to Applications's documentation!
========================================

Contents:

    :doc:`HGAP`

    :doc:`AHA`

    :doc:`ALLORA`

    :doc:`Evaluating-Assemblies`

    :doc:`pacBioToCA`

    :doc:`P_ErrorCorrection`


.. toctree::
   :maxdepth: 2



Indices and tables
==================

* :ref:`genindex`
* :ref:`search`